Python-dev package is installed - the actual package name depends Install Xcode if you are using Linux, you need to make sure If you are using Mac OSX, I recommend you May remove this submodule and add simde in dependencies of MACS3 Solve the compatibility issues on non-x86 architectures. Intel SSE2 intrinsics for x86 CPUs, we added A modified fermi-lite hasīeen included in MACS3 package. Sequence in a peak region while necessary. fermi-lite and simdeĪ newly added callvar subcommand in MACS3 uses Since it requires Cython, make sure you install Cythonįirst, then install cykhash. Note that hmmlearn further requires SciPy and sklearn (aka scikit-learn). MACS requires NumPy>=1.19 (>=1.24 recommended) and hmmlearn>=0.3 during installation. We have tested MACS in Python3.8 to 3.11. If you are using conda or pip to install, the installer will check theĭependencies and install them if necessary. Here we list some prerequisites for installing and running MACS3.
Please check the following instructions to complete your installation.
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